Ryan's Blog

Commands I don’t want to forget

Posted in Uncategorized by ryanlayer on January 28, 2010
$ macs -t s_2_eland_multi.txt -c s_4_eland_multi.txt --format ELANDMULTI --mfold 10 \
 --pvalue 1e-3 --bw 125 --name ORC3
$ find . -name "*submissionText.html" | cut -d "/" -f2 | mov.pl
$ cat html/main.html | append.pl > html/main2.html
$ grep -c -P "\t1:\d+:\d+|\t0:1:\d+|\t0:0:1" eland_multi.txt
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